techstaff:slurm
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techstaff:slurm [2017/08/21 15:55] – [Notice] kauffman | techstaff:slurm [2017/11/13 10:02] – kauffman | ||
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- | ===== Notice ===== | + | ===== Notice ===== |
- | The SLURM cluster will become unavailable starting | + | **2017-08-31**: Configuration change to allow allocation |
====== Peanut Job Submission Cluster ====== | ====== Peanut Job Submission Cluster ====== | ||
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* [[http:// | * [[http:// | ||
* [[https:// | * [[https:// | ||
- | + | * [[http:// | |
===== Infrastructure ===== | ===== Infrastructure ===== | ||
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* 64gb RAM | * 64gb RAM | ||
* 2x 500GB SATA 7200RPM in RAID1 | * 2x 500GB SATA 7200RPM in RAID1 | ||
- | |||
- | To better manage the cluster we have virtualized the job submission nodes and give them all resources of the hardware. So, the actual resources you can consume on any one node is: | ||
- | * 14 Cores, 14 threads | ||
- | * 62GB RAM | ||
==== Storage ==== | ==== Storage ==== | ||
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===== Usage ===== | ===== Usage ===== | ||
Below are some common examples. You should consult the [[http:// | Below are some common examples. You should consult the [[http:// | ||
+ | |||
+ | === Default Quotas === | ||
+ | By default we set a job to be run on one CPU and allocate 100MB of RAM. If you require more than that you should specify what you need. Using the following options will do: '' | ||
=== Exclusive access to a node === | === Exclusive access to a node === | ||
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=== Sample script === | === Sample script === | ||
Make sure you create a directory in which to deposit the '' | Make sure you create a directory in which to deposit the '' | ||
- | mkdir -p $HOME/ | + | mkdir -p $HOME/ |
< | < | ||
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#SBATCH --mail-user=cnetid@cs.uchicago.edu | #SBATCH --mail-user=cnetid@cs.uchicago.edu | ||
#SBATCH --mail-type=ALL | #SBATCH --mail-type=ALL | ||
- | #SBATCH --output=/ | + | #SBATCH --output=/ |
- | #SBATCH --error=/ | + | #SBATCH --error=/ |
#SBATCH --workdir=/ | #SBATCH --workdir=/ | ||
#SBATCH --partition=debug | #SBATCH --partition=debug | ||
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#SBATCH --nodes=1 | #SBATCH --nodes=1 | ||
#SBATCH --ntasks=1 | #SBATCH --ntasks=1 | ||
+ | #SBATCH --mem-per-cpu=500 | ||
#SBATCH --time=15: | #SBATCH --time=15: | ||
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user@host: | user@host: | ||
PARTITION AVAIL TIMELIMIT | PARTITION AVAIL TIMELIMIT | ||
- | debug* | + | debug* |
- | general | + | general |
+ | pascal | ||
+ | tesla up 3-00: | ||
</ | </ | ||
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srun -p general --pty --cpus-per-task 1 --mem 500 -t 0-06:00 /bin/bash | srun -p general --pty --cpus-per-task 1 --mem 500 -t 0-06:00 /bin/bash | ||
will start a command line shell ('' | will start a command line shell ('' | ||
- | ====== Job Scheduling ====== | ||
+ | |||
+ | ====== Job Scheduling ====== | ||
We use a [[http:// | We use a [[http:// | ||
/var/lib/dokuwiki/data/pages/techstaff/slurm.txt · Last modified: 2021/01/06 16:13 by kauffman