techstaff:aicluster
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techstaff:aicluster [2020/11/11 11:58] kauffman |
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| ====== AI Cluster - Slurm ====== | ====== AI Cluster - Slurm ====== | ||
| - | Cluster is up and running now. Anyone with a CS account who wishes to test it out should do so. | + | [[slurm:ai|This page has moved]] |
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| - | Feedback is requested: | + | |
| - | + | ||
| - | [[https://discord.gg/ZVjX8Gv|#ai-cluster Discord channel]] or email Phil Kauffman (kauffman@cs dot uchicago dot edu). | + | |
| - | + | ||
| - | Knowledge of how to use Slurm already is preferred at this stage of testing. | + | |
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| - | + | ||
| - | The information from the older cluster mostly applies and I suggest you read that documentation: https://howto.cs.uchicago.edu/techstaff:slurm | + | |
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| - | + | ||
| - | ====== Infrastructure ====== | + | |
| - | Summary of nodes installed on the cluster | + | |
| - | + | ||
| - | ===== Computer/GPU Nodes ===== | + | |
| - | * 6x nodes | + | |
| - | * 2x Xeon Gold 6130 CPU @ 2.10GHz (64 threads) | + | |
| - | * 192G RAM | + | |
| - | * 4x Nvidia GeForce RTX2080Ti | + | |
| - | + | ||
| - | * 2x nodes | + | |
| - | * 2x Xeon Gold 6130 CPU @ 2.10GHz (64 threads) | + | |
| - | * 384G RAM | + | |
| - | * 4x Nvidia Quadro RTX 8000 | + | |
| - | + | ||
| - | * all: | + | |
| - | * zfs mirror mounted at /local | + | |
| - | * compression to lz4: Usually this has a performance gain as less data is read and written to disk with a small overhead in CPU usage. | + | |
| - | * As of right now there is no mechanism to clean up /local. At some point I'll probably put a find command in cron that deletes files older than 90 days or so. | + | |
| - | + | ||
| - | ===== Storage ===== | + | |
| - | + | ||
| - | * ai-storage1: | + | |
| - | * 41T total storage | + | |
| - | * uplink to cluster network: 2x 25G | + | |
| - | * /home/<username> | + | |
| - | * We intend to set user quotas, however, there are no quotas right now. | + | |
| - | * /net/projects: (Please ignore this for now) | + | |
| - | * Lives on the home directory server. | + | |
| - | * Idea would be to create a dataset with a quota for people to use. | + | |
| - | * Normal LDAP groups that you are used to and available everywhere else would control access to these directories. e.g. jonaslab, sandlab | + | |
| - | + | ||
| - | * ai-storage2: | + | |
| - | * 41T total storage | + | |
| - | * uplink to cluster network: 2x 25G | + | |
| - | * /net/scratch: Create yourself a directory /net/scratch/$USER. Use it for whatever you want. | + | |
| - | * Eventually data will be auto deleted after X amount of time. Maybe 90 days or whatever we determine makes sense. | + | |
| - | + | ||
| - | * ai-storage3: | + | |
| - | * zfs mirror with previous snapshots of 'ai-storage1'. | + | |
| - | * NOT a backup. | + | |
| - | * Not enabled yet. | + | |
| - | + | ||
| - | + | ||
| - | ====== Demo ====== | + | |
| - | + | ||
| - | kauffman3 is my CS test account. | + | |
| - | + | ||
| - | <code> | + | |
| - | $ ssh kauffman3@fe.ai.cs.uchicago.edu | + | |
| - | </code> | + | |
| - | I've created a couple scripts that run some of the Slurm commands but with more useful output. cs-sinfo and cs-squeue being the only two right now. | + | |
| - | <code> | + | |
| - | kauffman3@fe01:~$ cs-sinfo | + | |
| - | NODELIST NODES PARTITION STATE CPUS S:C:T MEMORY TMP_DISK WEIGHT AVAIL_FEATURES REASON GRES | + | |
| - | a[001-006] 6 geforce* idle 64 2:16:2 190000 0 1 'turing,geforce,rtx2080ti,11g' none gpu:rtx2080ti:4 | + | |
| - | a[007-008] 2 quadro idle 64 2:16:2 383000 0 1 'turing,quadro,rtx8000,48g' none gpu:rtx8000:4 | + | |
| - | </code> | + | |
| - | <code> | + | |
| - | kauffman3@fe01:~$ cs-squeue | + | |
| - | JOBID PARTITION USER NAME NODELIST TRES_PER_NSTATE TIME | + | |
| - | </code> | + | |
| - | + | ||
| - | # List the device number of the devices I've requested from Slurm. | + | |
| - | # These numbers map to /dev/nvidia? | + | |
| - | <code> | + | |
| - | kauffman3@fe01:~$ cat ./show_cuda_devices.sh | + | |
| - | #!/bin/bash | + | |
| - | hostname | + | |
| - | echo $CUDA_VISIBLE_DEVICES | + | |
| - | </code> | + | |
| - | + | ||
| - | Give me all four GPUs on systems 1-6 | + | |
| - | <code> | + | |
| - | kauffman3@fe01:~$ srun -p geforce --gres=gpu:4 -w a[001-006] ./show_cuda_devices.sh | + | |
| - | a001 | + | |
| - | 0,1,2,3 | + | |
| - | a002 | + | |
| - | 0,1,2,3 | + | |
| - | a006 | + | |
| - | 0,1,2,3 | + | |
| - | a005 | + | |
| - | 0,1,2,3 | + | |
| - | a004 | + | |
| - | 0,1,2,3 | + | |
| - | a003 | + | |
| - | 0,1,2,3 | + | |
| - | </code> | + | |
| - | # give me all GPUs on systems 7-8 | + | |
| - | # these are the Quadro RTX 8000s | + | |
| - | <code> | + | |
| - | kauffman3@fe01:~$ srun -p quadro --gres=gpu:4 -w a[007-008] ./show_cuda_devices.sh | + | |
| - | a008 | + | |
| - | 0,1,2,3 | + | |
| - | a007 | + | |
| - | 0,1,2,3 | + | |
| - | </code> | + | |
| - | + | ||
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| - | + | ||
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| - | + | ||
| - | + | ||
| - | ====== Asked Questions ====== | + | |
| - | + | ||
| - | > Do we have a max job runtime? | + | |
| - | + | ||
| - | Yes. 4 hours. This is done per partition. You are expected to write your code to accommodate for this. | + | |
| - | + | ||
| - | <code> | + | |
| - | PartitionName=geforce Nodes=a[001-006] Default=YES DefMemPerCPU=2900 MaxTime=04:00:00 State=UP Shared | + | |
| - | =YES | + | |
| - | PartitionName=quadro Nodes=a[007-008] Default=NO DefMemPerCPU=5900 MaxTime=04:00:00 State=UP Shared= | + | |
| - | YES | + | |
| - | </code> | + | |
| - | + | ||
/var/lib/dokuwiki/data/attic/techstaff/aicluster.1605117515.txt.gz · Last modified: 2020/11/11 11:58 by kauffman
